CDS
| Accession Number | TCMCG022C40390 |
| gbkey | CDS |
| Protein Id | XP_039169743.1 |
| Location | join(48646183..48646207,48646764..48646894,48647240..48647357,48647533..48647759,48647844..48647946,48648599..48648669,48648947..48649021,48649099..48649242,48649376..48649558,48649560..48649698,48650469..48650984,48651546..48651602,48651688..48651756,48651827..48652430,48652517..48652533,48652634..48652758,48653170..48653244,48653337..48653449,48653929..48654045,48654135..48654207) |
| Gene | LOC104445316 |
| GeneID | 104445316 |
| Organism | Eucalyptus grandis |
Protein
| Length | 993aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA698663 |
| db_source | XM_039313809.1 |
| Definition | LOW QUALITY PROTEIN: katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.1 [Eucalyptus grandis] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGTCCAAGCGGGGCTACAAGCTGCAGGAATTTGTGGCCCATTCGTCCAATGTCAACTGTCTCAGTATTGGAAAGAAGGCATGCCGGCTTTTTCTCACTGGTGGAGATGACTGCAAGGTCAATCTATGGGCCATCGGCAAGCCGAATTCCTTGATGAGCCTTTGTGGTCATACAAATGCTGTAGAATCCGTAGCCTTTGATTCTGCAGAAGTGTTGGTGCTTGCTGGAGCTTCTTCTGGTGTCATTAAGCTGTGGGACGTGGAAGAAGCAAAGATGGTTCGTGGTCTTACTGGACACAGATCCAATTGCACCGCTATGGAATTCCATCCATTTGGAGAGTTCTTTGCATCTGGTTCCACCGACACAAATCTGAAGATATGGGATATCAGGAAGAAGGGATGTATACACACGTACAAGGGTCATACTCGAGGCATTAGCACCATCAGATTCTCTCCTGATGGTCGCTGGGTTGTTTCAGGGGGAAATGATAATGTTGTGAAGGTGTGGGATCTAACTGCTGGAAAGCTTTTGCATGATTTTAAGTTCCATGAAAATCATATCCGATCTATGGATTTCCATCCCTTGGAGTTCCTACTTGCTACAGGTTCGGCAGATAGAACGGTTAAATTCTGGGACTTGGAAACGTTTGAACTAATCGGATCTTCCAGACCTGAGGCCACAGGAGTACGTGCAATTGCCTTCCATCCTGATGGGAGGACCTTGTTCTGTGGTTTGGAGGATAGCTTAAAGGTTTACTCATGGGAGCCTGTAATCTGCCATGATGGTGTTGACATGGGATGGTCAACCCTTGCTGATCTTTGTATTCATGATGGAAAACTCTTGGGTTGCTCATATTACCAAAGTTCTGTTGGTGTTTGGGTAGCAGATGCGTCGCTTATTGAACCGTATGGAACTAATGTAAAGCCTCAGCAGAAGGATAGTGGGGATGATGAAATTGAACACCAAGAAAGTCGTTCCTCGGCTAAAGTTGGGACCACCATAAGATCAACTTCAATCATGCGCTGCGCCTCTCCGGATTATGAAACCAAAGACATAAAGAATATATATGTGGATAGTAGTTGGTTTTTATGTACTTTTATATTACTGTCAAATTCATATACCAATATGATAACACATGGTCCTATGCAAAGTACTGGAAGCTTAATGGCCTGTACTACTGGATGGAATGTATATATACAGTGCTCATCAGATGAGGCCGCTAGTGGTAATCCTGTTTCTTCACAGCGTGTTGGTACCACAAACTTTGCAAAAGTGACTCAACCGCTGGATTTTAACGACACTCCTAATTTGACACTACGGAGGCAGGGTTTGGTAACAGAAACGCCAGATGGATTAAGTGGGCATGTTCCTAGTAAATCTATTACTCAACCGAAAGTTGTTAGTAGGGACAGTCCTGATGGAAAAGACTCATCTCGAAGAGAATCTATTACTTTTTCAAGGACTAAACCGGGCATGTTGCTCAGGCCTGCTCATTCGAGGAGGCCGTCGAGCACCAAATATGATGTCGACAGGTTATCAGCATGTGCTGAAATTGGAGTGCTTAGCAGTGCAAAAAGTGGTTCTGAAAGTCTTGTAGATTCATTTTTTAACATCAAAGTTGCACCTGAAGATGGAGCAAGAAATGGCTGTGAAGACAATCATTCGAGTGTCAAGAATGTCTCTGTGGAATCTGAGAAGGTGCTACCACTGCAGACACCTAAAACAGAAAAGTGTGACCAAACTGTCAGTTTCAGAGAAGAAATCAACTCTGTCAAGTTTGTCAATGGAGTTGCAGTTGTGCCAGGCAGGACGCGCACTTTAGTTGAGAAGTTTGAAAAAAAGAGAAAAATTGAACAGCAGAACGAGGAAAAGAGTGACAGATTAAACATCGTTGAACAAAAGGCAACAAGAATGTCTTCTCATATGGTAACCCCTGAGGATAGAACACCTGTTACCCTTGTTGGCAGTACTGAAGATCAGTCAACTGTAATGGCTCCTCAAAGAGAATTACCAGCTGATGAATCAAGTAAAACTCCTCCATTGCCGGTTGAGGATTTGGAGATTCATCATGGATCAAATGTCAGTGAAGATAAGGCGACTATTTTGTCTTCTCAGACAGTATCAGAGGAGGATAGCAAACGCTCTACCCTTATTCGCAACTTCCGTAGAAGAGACAGATTTAAAAGTACTGAAGGTCGATCCCCTGTAATGGCTACTCAAAGAAAACTACCAACAGATGAATCAGGCAAAACTTCTTCTTTGCCAATGGAGGATTTGGAAATCAAAGGTGGATTGAATGTGAGTGAAGATAAGGCAACTAGTTTCTCTTCTCGTGCACCACCGAGGGAGGATAGAGCACACTCCGCTCTTGTTCGCAATGTTCGAAAAAGAGACAAATTCAAAAGTACTAATGATACAATTACTGTAATGGTTCATCAAAGAGGACTATTGACAGATGAAGCTACCTCCAACGACCACGAGAGGGGAACCTCAATATGTGGGAGTGAGTCAGACTCTGTTAACCATGAGGATGTCACTGAACTTCTACTGGGAAATCATGAAGTTTTCTTAAGTACTCTCCGTTCTCGCTTGACAAAACTACAGGTAGTCAGGCATTTCTTTGAAAGGAAAGATATGAAAGGTGCTATTAACGCATTGAGGAGGTTGCCGGATCATTCTGTTCAAGCAGATGTAATCAGCATCCTTACGGAAAAAATGGAGATGCTGAACTTAGATTTATTTTCTTGCTTGCTTCCTGTTCTTGTGGGTTTACTGGATAGCAAGGTAGAAAGGCATTCATGTGTGTCTCTCGAGATGCTACTAAAGCTTGTAGCAGTTTTTGGTTCAGTAGTTCGGTCAACAGTTTCTGCACCTCCGACTGTTGGTGTTGATCTACATGCTGAGCAAAGGCTAGAGTGCTGCAACCAGTGTTTTACAGAGCTGCAAAAGATCCAGAAAATCATACCTATGCTTGTGAGGTAG |
| Protein: MSKRGYKLQEFVAHSSNVNCLSIGKKACRLFLTGGDDCKVNLWAIGKPNSLMSLCGHTNAVESVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRGLTGHRSNCTAMEFHPFGEFFASGSTDTNLKIWDIRKKGCIHTYKGHTRGISTIRFSPDGRWVVSGGNDNVVKVWDLTAGKLLHDFKFHENHIRSMDFHPLEFLLATGSADRTVKFWDLETFELIGSSRPEATGVRAIAFHPDGRTLFCGLEDSLKVYSWEPVICHDGVDMGWSTLADLCIHDGKLLGCSYYQSSVGVWVADASLIEPYGTNVKPQQKDSGDDEIEHQESRSSAKVGTTIRSTSIMRCASPDYETKDIKNIYVDSSWFLCTFILLSNSYTNMITHGPMQSTGSLMACTTGWNVYIQCSSDEAASGNPVSSQRVGTTNFAKVTQPLDFNDTPNLTLRRQGLVTETPDGLSGHVPSKSITQPKVVSRDSPDGKDSSRRESITFSRTKPGMLLRPAHSRRPSSTKYDVDRLSACAEIGVLSSAKSGSESLVDSFFNIKVAPEDGARNGCEDNHSSVKNVSVESEKVLPLQTPKTEKCDQTVSFREEINSVKFVNGVAVVPGRTRTLVEKFEKKRKIEQQNEEKSDRLNIVEQKATRMSSHMVTPEDRTPVTLVGSTEDQSTVMAPQRELPADESSKTPPLPVEDLEIHHGSNVSEDKATILSSQTVSEEDSKRSTLIRNFRRRDRFKSTEGRSPVMATQRKLPTDESGKTSSLPMEDLEIKGGLNVSEDKATSFSSRAPPREDRAHSALVRNVRKRDKFKSTNDTITVMVHQRGLLTDEATSNDHERGTSICGSESDSVNHEDVTELLLGNHEVFLSTLRSRLTKLQVVRHFFERKDMKGAINALRRLPDHSVQADVISILTEKMEMLNLDLFSCLLPVLVGLLDSKVERHSCVSLEMLLKLVAVFGSVVRSTVSAPPTVGVDLHAEQRLECCNQCFTELQKIQKIIPMLVR |